PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009804882.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 191aa    MW: 21808.4 Da    PI: 5.4798
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009804882.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2621.3e-1956107256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     +y GVr ++ +g+++AeIrd + ng   r++lg+f+taeeAa a+++a+ +++g+
  XP_009804882.1  56 KYIGVRKRP-WGKYAAEIRDSTRNG--IRVWLGTFDTAEEAAMAYDQAAFSMRGA 107
                     89*******.**********44465..*************************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.67E-3055115No hitNo description
PROSITE profilePS5103222.03656114IPR001471AP2/ERF domain
PfamPF008477.1E-1456106IPR001471AP2/ERF domain
SMARTSM003804.5E-3556120IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-3056115IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-2356116IPR016177DNA-binding domain
PRINTSPR003675.1E-105768IPR001471AP2/ERF domain
PRINTSPR003675.1E-108096IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0009507Cellular Componentchloroplast
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MEHLKNQYQE QTSNVSIVAE EVKVKVEAES SIETNSSKER ETNDEEVNFN PRNPQKYIGV  60
RKRPWGKYAA EIRDSTRNGI RVWLGTFDTA EEAAMAYDQA AFSMRGAQTC LNFPVEKVRE  120
SLQKMECNNI KDGLLSPAAA LKEKHKKRNS RSSRKKQVNI KEEENVLIFE DLGPDLLDEL  180
LSSENSCCSN Y
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A2e-2755115464ATERF1
2gcc_A2e-2755115464ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1143155KHKKRNSRSSRKK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00286DAPTransfer from AT2G31230Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754501e-101HG975450.1 Solanum pennellii chromosome ch11, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009804882.11e-141PREDICTED: ethylene-responsive transcription factor 15-like
SwissprotQ8VYM04e-47ERF93_ARATH; Ethylene-responsive transcription factor 15
TrEMBLM1B0S43e-76M1B0S4_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000344909e-76(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31230.15e-30ethylene-responsive element binding factor 15